Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906995.1_cds_XP_016457143.1_50901
CDS Infomation

[gene=LOC107781031] [db_xref=GeneID:107781031] [protein=pentatricopeptide repeat-containing protein At5g56310-like] [protein_id=XP_016457143.1] [location=18500..19957] [gbkey=CDS]
Sequence

ATGACAAGGAGGATGTTCTCAATAATGGTCCCGCCAAAATGGAACCTCTTCAAGTTCAGG
CGACTCCATAGCAGGCACCTCTGTACTATCACCGTTGGTCCTTATTCTCCTCCACGCTTG
TCTCTTCTAGCCGACCAATGCACTTCAATGTACCAACTCAAGCAAATCCATGCCCAAATG
ATCATCACTGCCCGTATCCACGACAATTATGCTGCCAGCCGCTTACTAACCTTCTGTGCT
CTTTCGGAATCCGGTAACCTTTCTTATGCCTTAAAACTTTTTGATAGTATCAATGAACCC
AATTCATTCATGTGGAACACTCTCATTAGAGCTCAAGCTGGTAGCTCAACTCCCCAACAA
GCCTTGCTCCGTTATGTAAAAATGCGAAGGCTTTGCGTCAGTCCCGGCAAACATACATTC
CCTTTTGTACTCAAGGCTTGTTCTAACTTGATGTGTATTTCTGTTAGTAAACAAGTGCAT
TGCCATGTCATTAAATTCGGGTTGGATTTAGATTTGCATGTTGTTAATGGTTTGACCAGA
GTATATTCTGTTTGTCGTGTATTAAAGGATGCACGGAGAGTGTTCGATGAAATTACTGAG
CGAAATTTGAGTATTTGGACGACGATGATTTGTGGGTTTGCTCAGAATGATAGGTATAGT
GACGCTATTCAGTTGTTTGAGCGTATGCTTGCAGATGGAATCGAGCCCAATGGAGCTACC
TTGGCTTCTGTTTTGTCAGCTTGTGCTCAGTCGGATAGTTTGCAATTAGGAGAACAGATT
CACGTATATATGGAAGAAAAAGGGATAGAATTAGGAGTGATTCTTGGCACGGCGTTAGTG
AACATGTATGCAAAGAATGGTGCCATAGTAGAAGCAAAGAAGTGTTTCAGTGCTATGCGA
GAAAGGAATATTGCAACTTGGAATGCAATGATTTGTGGTTTAGCTGCTCATGGGCATGCG
AAAGAAGCAATTAACTTCTTTAAGAAGCTAGAACAAGAAAAAGTAAAGCCAAATGATATT
ACACTAGTTGGGGTTCTGTCAGCATGCTGCCATGCCGGATTGTTTGACTATGGTGAAGGA
ATATTTCACTCCATGAAAGAGTTGTATGGTATAGAGCCCAAGATTGAGCATTATGGATGT
GTGGTTGACATCCTTGGGCGTAATGGGAAACTGCTAGAAGCTGAGCTGCTCATAAGAGGA
ATGGTTTTGAAGGCTGACGTGGTTATCTGGGGATCCTTATTACATGCATGTCAGAGCCAT
GGAAACATAGATATTGCAGAACGAGTTGTGAAAGAAATTCTGCTTTTGAATCCAAATAGT
CATGGTGTTTATGTTGTTTTATCTAATATGTATGCAGAGGCTGGAAGATGGGAGGATGTG
GTAAAACTAAGGAAGCAGATGAAAGAGGGAAGCTTAAAGAAAACACCGGGTTGGAGCCTT
GTAAATGGTGCTACATAA

Peptide Sequence

PEP ID

XP_016457143.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Nicotiana tabacum]
Sequence

MTRRMFSIMVPPKWNLFKFRRLHSRHLCTITVGPYSPPRLSLLADQCTSMYQLKQIHAQM
IITARIHDNYAASRLLTFCALSESGNLSYALKLFDSINEPNSFMWNTLIRAQAGSSTPQQ
ALLRYVKMRRLCVSPGKHTFPFVLKACSNLMCISVSKQVHCHVIKFGLDLDLHVVNGLTR
VYSVCRVLKDARRVFDEITERNLSIWTTMICGFAQNDRYSDAIQLFERMLADGIEPNGAT
LASVLSACAQSDSLQLGEQIHVYMEEKGIELGVILGTALVNMYAKNGAIVEAKKCFSAMR
ERNIATWNAMICGLAAHGHAKEAINFFKKLEQEKVKPNDITLVGVLSACCHAGLFDYGEG
IFHSMKELYGIEPKIEHYGCVVDILGRNGKLLEAELLIRGMVLKADVVIWGSLLHACQSH
GNIDIAERVVKEILLLNPNSHGVYVVLSNMYAEAGRWEDVVKLRKQMKEGSLKKTPGWSL
VNGAT

Transcript Sequence

Gene sequence data has not been registered.